BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031A01SP1|AL429310
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1417 1632 0.0
>3x_Contig1417
Length = 10492
Score = 1632 bits (816), Expect = 0.0
Identities = 839/854 (98%)
Strand = Plus / Minus
Query: 1 ggawatggacaaactccataatttcaccttttgcttcatcacacccagcaacatccttaa 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2778 ggaaatggacaaactccataatttcaccttttgcttcatcacacccagcaacatccttaa 2719
Query: 61 atttwactttgatatcagtttccttgttgawaagtttggcgcgcgattttccgacaccga 120
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2718 atttaactttgatatcagtttccttgttgaaaagtttggcgcgcgattttccgacaccga 2659
Query: 121 acataccgccaagatcacctccagcaccacctccagcaccacccatccttttagtagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 acataccgccaagatcacctccagcaccacctccagcaccacccatccttttagtagtca 2599
Query: 181 aatatagcaacccaccgagtagtaagadagtdggtatgadgggaacaatgttctgcratg 240
||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||| |||
Sbjct: 2598 aatatagcaacccaccgagtagtaagaaagtaggtatgaagggaacaatgtactgcaatg 2539
Query: 241 gagaraccttttcagcgtatgtgatcggratacgatcatgttcaggaatattcaatttgt 300
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2538 gagaaaccttttcagcgtatgtgatcggaatacgatcatgttcaggaatattcaatttgt 2479
Query: 301 cttgaatctgatccatttgttcttcgaatatgtcgacagacccaatggtaaatgcbatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2478 cttgaatctgatccatttgttcttcgaatatgtcgacagacccaatggtaaatgcaatga 2419
Query: 361 tagggttagctgttggtacagagaagaatccgttacctgagcctaaatgttgagtggcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2418 tagggttagctgttggtacagagaagaatccgttacctgagcctaaatgttgagtggcct 2359
Query: 421 ccggaagtaattcagcctcaaccaaatacttgttcacgatatatatttttttcacaagac 480
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 2358 ccggaagtaattcagcctcaaccaaatacttgttcacgatatatatttctctcacaagac 2299
Query: 481 ctttttctagatattttgtcttaaagtcttggaaagtgagaagttggttatccatctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2298 ctttttctagatattttgtcttaaagtcttggaaagtgagaagttggttatccatctgtt 2239
Query: 541 gacctgagggagtggttaaaatgtggaagaaaaatgtcaacccaacagtaaggtataatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2238 gacctgagggagtggttaaaatgtggaagaaaaatgtcaacccaacagtaaggtataatg 2179
Query: 601 aacggaaaaattctttggatttgaaataatcagatacatttttgaattcctgattcttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2178 aacggaaaaattctttggatttgaaataatcagatacatttttgaattcctgattcttgt 2119
Query: 661 cgtcgccttctccattttggttctttttctgttcgttctcgtctttcttattctgttcgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 cgtcgccttctccattttggttctttttctgttcgttctcgtctttcttattctgttcgt 2059
Query: 721 tattgtccttttgctgatctttgaatgttctgccactgtgttggaaatttagccttgaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2058 tattgtccttttgctgatctttgaatgttctgccactgtgttggaaatttagccttgaat 1999
Query: 781 ccgcgtggragtttcttacattgctatagtttcccmaatctggtatctttgcatacagtg 840
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1998 ccgcgtggaagtttcttacattgctatagtttcccaaatctggtatctttgcatacagtg 1939
Query: 841 atgtgctgaaacca 854
||||||||||||||
Sbjct: 1938 atgtgctgaaacca 1925
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6291
Number of Sequences: 1807
Number of extensions: 6291
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)